Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs506241 chr13:71363603 G/T 1.89E-5 110 0 5 16.27 KM Plot
LAML rs509514 chr13:21839048 T/C 2.24E-8 106 16.23 12.2 0 KM Plot
LAML rs519880 chr13:21841544 T/C 2.24E-8 106 16.23 12.2 0 KM Plot
LAML rs519882 chr13:21841540 T/C 2.24E-8 106 16.23 12.2 0 KM Plot
LAML rs529794 chr13:21848406 T/C 1.62E-8 105 16.2 15.23 0 KM Plot
LAML rs536209 chr13:21847714 C/T 1.06E-8 109 16.2 13.1 0 KM Plot
LAML rs537626 chr11:69307695 C/G 0.000107 111 0 8.13 16.77 KM Plot
LAML rs537696 chr1:55031313 A/C 0.000164 111 1.02 10.13 16.23 KM Plot
LAML rs540527 chr13:71370726 G/A 1.89E-5 110 0 5 16.27 KM Plot
LAML rs540612 chr13:71355381 C/T 1.89E-5 110 0 5 16.27 KM Plot
LAML rs547624 chr8:17662170 A/G 0.000119 111 12.2 21.37 0 KM Plot
LAML rs553572 chr13:71347123 G/A 1.89E-5 110 0 5 16.27 KM Plot
LAML rs55663102 chr19:16245697 A/G 7.61E-5 110 16.23 8.13 0 KM Plot
LAML rs557400 chr17:39337627 T/G 0.000153 111 0 20.25 13.15 KM Plot
LAML rs55742421 chr10:961037 A/C 4.43E-5 110 15.23 14.63 5.1 KM Plot